![]() It can be, for all intent and purpose, your research metadata.Īlthough not a necessary requirement, it is easiest to configure and generate Markdown output from within RStudio. Think about this for a moment in your role as a research scientist: By using Markdown you can fully replicate the analytical processes that underlay your research, showing the code you employ, the output it generates, be it numeric or graphical, plus text explanations about the analytical processes of your work. This is addition to the text formatting mentioned above. In the case of R, and Markdown as an example of a document Markdown language, it provides a means to embed - and actually run - R code from within a single document, all using simple syntax coding. html format for browsers or many different text formats. Formats are fairly flexible, including output in. You “markdown” text, including, for example, document formatting such as boldface, headers, lists, and mathematical symbols and equations, pictures, links to other files or webpages - in short, just about anything you see on a webpage, journal article, or book, can be constructed using Markdown. It evolved as means to embed formatting syntax into a document and have it rapidly and easily converted to a desired format. Markdown still involves embedding additional elements into a document, but has a slightly different purpose. For example, by clicking the “REVIEW” tab on a MS Word document you initiate a “markup” process where a reviewer’s comments and editorial suggestions are shown on the document. A document markup language is a way to distinguish basic text from other document elements, such as those that occur during an editorial review. Some more info on icon available here and here.Markdown is a form of document markup language. Icon::fa("rocket") # equivalent to icon::fa_rocket()Īnd you’ll get this. Then add the following bit of code in your RMarkdown document. Install developer version from github # install.packages("devtools")ĭevtools::install_github("ropenscilabs/icon") When knitting to PDF I have found the easiest way using the icon package. In the YAML doc add the following bit of code under the relevent section icon: fa-icon e.g. for the rstudio icon use fa-r-project for this iconĮxample - partial YAML doc, for more info on RMarkdown webpages/YAML head to RMarkdown Webpages section navbar: You can add icons to the nav bar on your webpage, just like on this one. This code Info will produce this badge Info in html document, more details found here Then use the following code to insert your icons, for example this produces a lovely bug for you. If you want to use Ionicons then include you will first need to make sure the following line appears within your Rmarkdown doc (don’t worry it wont appear in the knitted product). To start with the most commonly used icons are from font awesome suite - so head here to pick your ( free) icons.įor HTML docs (including webpages), I have found the following works best this will give you a beautiful RStudio icon. As always there is more than one way to this. Three or more asterisks or dashes *** or -ĭepending on the type of RMarkdown document you are working with (i.e. what are you “knitting” to), will depend on which code works for you. ![]() To get strike through ~~strike~~ renders to this strike A pair of carets ( ^) produce a superscript (e.g., Cu^2+^ renders Cu 2+). Produced using a pair of double asterisks **text3** or _text4_ which will look like this text3 or text4.Ī pair of tildes ( ~) turn text to a subscript (e.g., H~3~PO~4~ renders H 3PO 4). Can be producted by either _text1_ or *text1* which will look this text1 or text2.
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